Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 AC041040.2-201ENST00000622926 2899 ntBASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH19Q8TAB3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 AHCYP2-201ENST00000430630 1300 ntBASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH19Q8TAB3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AC026954.1-201ENST00000429771 1293 ntBASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 CICP12-201ENST00000455801 843 ntBASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 PPY2P-201ENST00000582808 702 ntBASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 ZACNP1-201ENST00000612259 710 ntBASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms