Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AL035420.2-201ENST00000433587 616 ntTSL 3 BASIC8.81□□□□□ -1
SVIPQ8NHG7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC8.81□□□□□ -1
SVIPQ8NHG7 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC8.81□□□□□ -1
SVIPQ8NHG7 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 EIF4EP5-201ENST00000528228 640 ntBASIC8.81□□□□□ -1
SVIPQ8NHG7 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC8.81□□□□□ -1
SVIPQ8NHG7 NBPF5P-202ENST00000545941 1032 ntBASIC8.81□□□□□ -1
SVIPQ8NHG7 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 AC104758.5-201ENST00000569892 571 ntTSL 3 BASIC8.81□□□□□ -1
SVIPQ8NHG7 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 AC004893.2-201ENST00000360902 3398 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC8.81□□□□□ -1
SVIPQ8NHG7 NCALD-212ENST00000519508 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 NPC1L1-201ENST00000289547 5048 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 ABCD4-201ENST00000356924 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 RABEPK-203ENST00000373544 2450 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC8.81□□□□□ -1
SVIPQ8NHG7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.81□□□□□ -1
SVIPQ8NHG7 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 AC104758.3-203ENST00000562938 2123 ntBASIC8.81□□□□□ -1
SVIPQ8NHG7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 ZNF155-202ENST00000407951 2222 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 IL9RP3-201ENST00000442856 1674 ntBASIC8.81□□□□□ -1
SVIPQ8NHG7 CA8-201ENST00000317995 3812 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 RNF207-201ENST00000377939 3924 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
SVIPQ8NHG7 AC006372.3-201ENST00000444158 4049 ntTSL 1 (best) BASIC8.81□□□□□ -1
SVIPQ8NHG7 ZNF691-204ENST00000372506 1859 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 LINC01426-202ENST00000420877 2632 ntTSL 2 BASIC8.81□□□□□ -1
SVIPQ8NHG7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC8.81□□□□□ -1
SVIPQ8NHG7 ARMC8-217ENST00000481646 3043 ntTSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 AP4S1-201ENST00000216366 2256 ntTSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 SLC25A17-210ENST00000435456 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 TM2D1-202ENST00000371177 3218 ntTSL 5 BASIC8.8□□□□□ -1
SVIPQ8NHG7 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 IFIT3-201ENST00000371811 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 TNFAIP1-201ENST00000226225 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC8.8□□□□□ -1
SVIPQ8NHG7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC8.8□□□□□ -1
SVIPQ8NHG7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.8□□□□□ -1
SVIPQ8NHG7 TP53TG3F-201ENST00000617705 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 SLC12A3-202ENST00000438926 5567 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 KLHDC4-205ENST00000446344 4444 ntBASIC8.8□□□□□ -1
SVIPQ8NHG7 EIF2A-214ENST00000487799 1913 ntTSL 2 BASIC8.8□□□□□ -1
SVIPQ8NHG7 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
SVIPQ8NHG7 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.8□□□□□ -1
SVIPQ8NHG7 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.8□□□□□ -1
SVIPQ8NHG7 SMIM8-204ENST00000392863 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 AL157714.2-203ENST00000438275 2400 ntTSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 DCK-204ENST00000504952 2614 ntTSL 3 BASIC8.8□□□□□ -1
SVIPQ8NHG7 AC005070.3-201ENST00000607968 2646 ntBASIC8.8□□□□□ -1
SVIPQ8NHG7 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
SVIPQ8NHG7 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
SVIPQ8NHG7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SVIPQ8NHG7 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC8.8□□□□□ -1
SVIPQ8NHG7 NPM1P30-201ENST00000425092 828 ntBASIC8.8□□□□□ -1
SVIPQ8NHG7 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC8.8□□□□□ -1
SVIPQ8NHG7 AC073648.2-201ENST00000510116 352 ntBASIC8.8□□□□□ -1
SVIPQ8NHG7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 ADD3-201ENST00000277900 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC8.8□□□□□ -1
SVIPQ8NHG7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
SVIPQ8NHG7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 SCNN1B-201ENST00000307331 2085 ntTSL 5 BASIC8.8□□□□□ -1
SVIPQ8NHG7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SVIPQ8NHG7 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.8□□□□□ -1
SVIPQ8NHG7 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.8□□□□□ -1
SVIPQ8NHG7 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms