RNA–Protein interactions for RNA: ENST00000392863.5

SMIM8-204, Transcript of small integral membrane protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM8, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-204ENST00000392863 NISCHQ9Y2I1 1504 aa22.27■■□□□ 1.16
SMIM8-204ENST00000392863 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
SMIM8-204ENST00000392863 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
SMIM8-204ENST00000392863 HRCP23327 699 aa19.32■□□□□ 0.68
SMIM8-204ENST00000392863 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
SMIM8-204ENST00000392863 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
SMIM8-204ENST00000392863 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
SMIM8-204ENST00000392863 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.64
SMIM8-204ENST00000392863 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
SMIM8-204ENST00000392863 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
SMIM8-204ENST00000392863 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
SMIM8-204ENST00000392863 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
SMIM8-204ENST00000392863 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
SMIM8-204ENST00000392863 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
SMIM8-204ENST00000392863 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
SMIM8-204ENST00000392863 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
SMIM8-204ENST00000392863 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
SMIM8-204ENST00000392863 ABCC9O60706 1549 aa17.96■□□□□ 0.47
SMIM8-204ENST00000392863 FAM9AQ8IZU1 332 aaPredicted RBP17.96■□□□□ 0.46
SMIM8-204ENST00000392863 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
SMIM8-204ENST00000392863 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
SMIM8-204ENST00000392863 RSF1Q96T23 1441 aaPredicted RBP17.87■□□□□ 0.45
SMIM8-204ENST00000392863 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
SMIM8-204ENST00000392863 NEUROD1Q13562 356 aa17.78■□□□□ 0.44
SMIM8-204ENST00000392863 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.43
SMIM8-204ENST00000392863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
SMIM8-204ENST00000392863 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
SMIM8-204ENST00000392863 GTF3C3Q9Y5Q9 886 aa17.62■□□□□ 0.41
SMIM8-204ENST00000392863 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
SMIM8-204ENST00000392863 DIEXFQ68CQ4 756 aaKnown RBP17.56■□□□□ 0.4
SMIM8-204ENST00000392863 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
SMIM8-204ENST00000392863 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
SMIM8-204ENST00000392863 MROH2BQ7Z745 1585 aa17.43■□□□□ 0.38
SMIM8-204ENST00000392863 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
SMIM8-204ENST00000392863 WIZO95785 1651 aa17.39■□□□□ 0.37
SMIM8-204ENST00000392863 MYT1Q01538 1121 aa17.34■□□□□ 0.37
SMIM8-204ENST00000392863 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
SMIM8-204ENST00000392863 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
SMIM8-204ENST00000392863 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.36
SMIM8-204ENST00000392863 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
SMIM8-204ENST00000392863 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
SMIM8-204ENST00000392863 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
SMIM8-204ENST00000392863 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
SMIM8-204ENST00000392863 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
SMIM8-204ENST00000392863 MIER1Q8N108 512 aa17.19■□□□□ 0.34
SMIM8-204ENST00000392863 SOGA1O94964 1423 aa17.14■□□□□ 0.33
SMIM8-204ENST00000392863 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
SMIM8-204ENST00000392863 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.33
SMIM8-204ENST00000392863 NACADO15069 1562 aa17.08■□□□□ 0.32
SMIM8-204ENST00000392863 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
SMIM8-204ENST00000392863 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
SMIM8-204ENST00000392863 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
SMIM8-204ENST00000392863 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
SMIM8-204ENST00000392863 SMARCA2P51531 1590 aa16.97■□□□□ 0.31
SMIM8-204ENST00000392863 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
SMIM8-204ENST00000392863 EEA1Q15075 1411 aa16.9■□□□□ 0.3
SMIM8-204ENST00000392863 SMARCA4P51532 1647 aa16.87■□□□□ 0.29
SMIM8-204ENST00000392863 SUPT16HQ9Y5B9 1047 aaKnown RBP16.83■□□□□ 0.28
SMIM8-204ENST00000392863 CLIP1P30622 1438 aa16.78■□□□□ 0.28
SMIM8-204ENST00000392863 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
SMIM8-204ENST00000392863 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
SMIM8-204ENST00000392863 KIF21BO75037 1637 aa16.74■□□□□ 0.27
SMIM8-204ENST00000392863 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
SMIM8-204ENST00000392863 SYNJ1O43426 1573 aa16.71■□□□□ 0.27
SMIM8-204ENST00000392863 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
SMIM8-204ENST00000392863 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
SMIM8-204ENST00000392863 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
SMIM8-204ENST00000392863 CLSPNQ9HAW4 1339 aa16.66■□□□□ 0.26
SMIM8-204ENST00000392863 UNC13AQ9UPW8 1703 aa16.66■□□□□ 0.26
SMIM8-204ENST00000392863 APLP2Q06481 763 aa16.65■□□□□ 0.26
SMIM8-204ENST00000392863 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
SMIM8-204ENST00000392863 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
SMIM8-204ENST00000392863 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
SMIM8-204ENST00000392863 KANK4Q5T7N3 995 aaPredicted RBP16.55■□□□□ 0.24
SMIM8-204ENST00000392863 BCANQ96GW7 911 aa16.51■□□□□ 0.23
SMIM8-204ENST00000392863 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
SMIM8-204ENST00000392863 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
SMIM8-204ENST00000392863 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMIM8-204ENST00000392863 PEG3Q9GZU2 1588 aa16.44■□□□□ 0.22
SMIM8-204ENST00000392863 RRBP1Q9P2E9 1410 aaKnown RBP16.43■□□□□ 0.22
SMIM8-204ENST00000392863 FKBP8Q14318 412 aa16.41■□□□□ 0.22
SMIM8-204ENST00000392863 CUX2O14529 1486 aa16.41■□□□□ 0.22
SMIM8-204ENST00000392863 ITGAEP38570 1179 aa16.39■□□□□ 0.21
SMIM8-204ENST00000392863 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
SMIM8-204ENST00000392863 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
SMIM8-204ENST00000392863 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
SMIM8-204ENST00000392863 PRXQ9BXM0 1461 aa16.36■□□□□ 0.21
SMIM8-204ENST00000392863 CCNB3Q8WWL7 1395 aa16.35■□□□□ 0.21
SMIM8-204ENST00000392863 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
SMIM8-204ENST00000392863 DDX10Q13206 875 aaKnown RBP16.34■□□□□ 0.21
SMIM8-204ENST00000392863 RBM19Q9Y4C8 960 aaKnown RBP16.33■□□□□ 0.2
SMIM8-204ENST00000392863 RAB3GAP2Q9H2M9 1393 aa16.32■□□□□ 0.2
SMIM8-204ENST00000392863 ATAD2BQ9ULI0 1458 aa16.32■□□□□ 0.2
SMIM8-204ENST00000392863 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
SMIM8-204ENST00000392863 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
SMIM8-204ENST00000392863 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
SMIM8-204ENST00000392863 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
SMIM8-204ENST00000392863 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
SMIM8-204ENST00000392863 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
SMIM8-204ENST00000392863 TRIM52Q96A61 297 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms