RNA–Protein interactions for RNA: ENST00000325590.9

AMPH-201, Transcript of amphiphysin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AMPH, Length 3,145 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-201ENST00000325590 NISCHQ9Y2I1 1504 aa19.08■□□□□ 0.65
AMPH-201ENST00000325590 CCDC180Q9P1Z9 1646 aa16.57■□□□□ 0.24
AMPH-201ENST00000325590 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.17
AMPH-201ENST00000325590 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
AMPH-201ENST00000325590 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
AMPH-201ENST00000325590 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
AMPH-201ENST00000325590 ABCC9O60706 1549 aa15.54■□□□□ 0.08
AMPH-201ENST00000325590 HRCP23327 699 aa15.51■□□□□ 0.07
AMPH-201ENST00000325590 PELP1Q8IZL8 1130 aaKnown RBP15.47■□□□□ 0.07
AMPH-201ENST00000325590 MYO15BQ96JP2 1530 aa15.44■□□□□ 0.06
AMPH-201ENST00000325590 SCRIBQ14160 1630 aa15.34■□□□□ 0.05
AMPH-201ENST00000325590 NACADO15069 1562 aa15.34■□□□□ 0.05
AMPH-201ENST00000325590 PPARGC1BQ86YN6 1023 aaKnown RBP15.32■□□□□ 0.04
AMPH-201ENST00000325590 MYT1Q01538 1121 aa15.22■□□□□ 0.03
AMPH-201ENST00000325590 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.02
AMPH-201ENST00000325590 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
AMPH-201ENST00000325590 RB1CC1Q8TDY2 1594 aa15.18■□□□□ 0.02
AMPH-201ENST00000325590 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
AMPH-201ENST00000325590 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
AMPH-201ENST00000325590 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
AMPH-201ENST00000325590 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
AMPH-201ENST00000325590 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
AMPH-201ENST00000325590 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
AMPH-201ENST00000325590 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
AMPH-201ENST00000325590 WIZO95785 1651 aa14.73□□□□□ -0.05
AMPH-201ENST00000325590 BAZ1AQ9NRL2 1556 aaPredicted RBP14.7□□□□□ -0.06
AMPH-201ENST00000325590 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
AMPH-201ENST00000325590 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
AMPH-201ENST00000325590 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
AMPH-201ENST00000325590 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
AMPH-201ENST00000325590 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
AMPH-201ENST00000325590 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
AMPH-201ENST00000325590 PEG3Q9GZU2 1588 aa14.44□□□□□ -0.1
AMPH-201ENST00000325590 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
AMPH-201ENST00000325590 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
AMPH-201ENST00000325590 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
AMPH-201ENST00000325590 NEUROD1Q13562 356 aa14.38□□□□□ -0.11
AMPH-201ENST00000325590 ACIN1Q9UKV3 1341 aaKnown RBP14.38□□□□□ -0.11
AMPH-201ENST00000325590 CCDC88BA6NC98 1476 aa14.36□□□□□ -0.11
AMPH-201ENST00000325590 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
AMPH-201ENST00000325590 GTF3C3Q9Y5Q9 886 aa14.34□□□□□ -0.11
AMPH-201ENST00000325590 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.13
AMPH-201ENST00000325590 PRKCSHP14314 528 aaPredicted RBP14.26□□□□□ -0.13
AMPH-201ENST00000325590 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
AMPH-201ENST00000325590 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
AMPH-201ENST00000325590 HMGXB3Q12766 1538 aa14.17□□□□□ -0.14
AMPH-201ENST00000325590 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
AMPH-201ENST00000325590 CENPBP07199 599 aaPredicted RBP14.14□□□□□ -0.15
AMPH-201ENST00000325590 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.16
AMPH-201ENST00000325590 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
AMPH-201ENST00000325590 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
AMPH-201ENST00000325590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
AMPH-201ENST00000325590 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
AMPH-201ENST00000325590 SYNJ1O43426 1573 aa14□□□□□ -0.17
AMPH-201ENST00000325590 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
AMPH-201ENST00000325590 ERICH6Q7L0X2 663 aa13.97□□□□□ -0.17
AMPH-201ENST00000325590 CCER1Q8TC90 406 aaPredicted RBP13.97□□□□□ -0.17
AMPH-201ENST00000325590 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
AMPH-201ENST00000325590 YTHDC1Q96MU7 727 aaKnown RBP13.96□□□□□ -0.18
AMPH-201ENST00000325590 PRDM2Q13029 1718 aa13.96□□□□□ -0.18
AMPH-201ENST00000325590 APLP2Q06481 763 aa13.94□□□□□ -0.18
AMPH-201ENST00000325590 SOGA1O94964 1423 aa13.92□□□□□ -0.18
AMPH-201ENST00000325590 CFTRP13569 1480 aa13.91□□□□□ -0.18
AMPH-201ENST00000325590 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
AMPH-201ENST00000325590 BIVM-ERCC5R4GMW8 1640 aa13.89□□□□□ -0.19
AMPH-201ENST00000325590 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
AMPH-201ENST00000325590 CUX1P39880 1505 aa13.82□□□□□ -0.2
AMPH-201ENST00000325590 EEA1Q15075 1411 aa13.8□□□□□ -0.2
AMPH-201ENST00000325590 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
AMPH-201ENST00000325590 NESP48681 1621 aa13.73□□□□□ -0.21
AMPH-201ENST00000325590 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
AMPH-201ENST00000325590 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
AMPH-201ENST00000325590 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
AMPH-201ENST00000325590 KIF21BO75037 1637 aa13.71□□□□□ -0.21
AMPH-201ENST00000325590 MIER1Q8N108 512 aa13.7□□□□□ -0.22
AMPH-201ENST00000325590 ZNF316A6NFI3 1004 aaPredicted RBP13.69□□□□□ -0.22
AMPH-201ENST00000325590 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
AMPH-201ENST00000325590 GOLGA3Q08378 1498 aa13.68□□□□□ -0.22
AMPH-201ENST00000325590 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
AMPH-201ENST00000325590 ANP32EQ9BTT0 268 aa13.66□□□□□ -0.22
AMPH-201ENST00000325590 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
AMPH-201ENST00000325590 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
AMPH-201ENST00000325590 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
AMPH-201ENST00000325590 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
AMPH-201ENST00000325590 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
AMPH-201ENST00000325590 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
AMPH-201ENST00000325590 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
AMPH-201ENST00000325590 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
AMPH-201ENST00000325590 TOPBP1Q92547 1522 aa13.58□□□□□ -0.24
AMPH-201ENST00000325590 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
AMPH-201ENST00000325590 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
AMPH-201ENST00000325590 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
AMPH-201ENST00000325590 CUX2O14529 1486 aa13.55□□□□□ -0.24
AMPH-201ENST00000325590 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
AMPH-201ENST00000325590 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
AMPH-201ENST00000325590 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
AMPH-201ENST00000325590 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
AMPH-201ENST00000325590 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
AMPH-201ENST00000325590 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
AMPH-201ENST00000325590 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms