Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 AC103988.2-201ENST00000561804 725 ntBASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 AL391069.4-201ENST00000609583 481 ntBASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NANOGP1Q8N7R0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NANOGP1Q8N7R0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.15□□□□□ -0.31
NANOGP1Q8N7R0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AP000344.2-201ENST00000512987 629 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AC022616.1-201ENST00000518688 554 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 PGAM5P1-201ENST00000518923 814 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 KRT126P-201ENST00000549467 1181 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AC044860.1-202ENST00000559481 777 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AC005829.1-201ENST00000570002 483 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AC138761.1-201ENST00000584393 385 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AL596442.2-201ENST00000610240 980 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AC120114.3-201ENST00000611923 658 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 AL138828.2-201ENST00000615812 383 ntBASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NANOGP1Q8N7R0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 AL023775.1-201ENST00000454907 1746 ntBASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NANOGP1Q8N7R0 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms