Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 AP001065.2-201ENST00000617205 644 ntBASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 MIR7845-201ENST00000618396 99 ntBASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
KDM3BQ7LBC6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 AC007952.5-201ENST00000572818 1486 ntBASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 KRT18P15-201ENST00000458108 1291 ntBASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
KDM3BQ7LBC6 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 HMGA1P1-201ENST00000415560 1062 ntBASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 AL354861.1-201ENST00000445213 355 ntBASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 OR5BD1P-201ENST00000532527 817 ntBASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC18.25■□□□□ 0.51
KDM3BQ7LBC6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 HSPA7-201ENST00000445535 1927 ntBASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 AL592076.1-201ENST00000424448 303 ntBASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 RPL7P35-201ENST00000446943 740 ntBASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 LYPLA2P1-203ENST00000447689 696 ntBASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 AC018463.1-201ENST00000456674 917 ntBASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 AC068867.1-201ENST00000559855 150 ntBASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.24■□□□□ 0.51
KDM3BQ7LBC6 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms