Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.84□□□□□ -0.35
UBA52P62987 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UBA52P62987 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBA52P62987 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
UBA52P62987 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.83□□□□□ -0.35
UBA52P62987 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBA52P62987 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBA52P62987 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.83□□□□□ -0.35
UBA52P62987 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.83□□□□□ -0.35
UBA52P62987 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
UBA52P62987 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.35
UBA52P62987 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBA52P62987 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
UBA52P62987 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBA52P62987 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 FO393414.2-201ENST00000405153 598 ntBASIC12.83□□□□□ -0.36
UBA52P62987 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.83□□□□□ -0.36
UBA52P62987 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.83□□□□□ -0.36
UBA52P62987 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.83□□□□□ -0.36
UBA52P62987 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
UBA52P62987 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.83□□□□□ -0.36
UBA52P62987 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.83□□□□□ -0.36
UBA52P62987 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 AL365330.1-201ENST00000607459 531 ntBASIC12.83□□□□□ -0.36
UBA52P62987 MIR6775-201ENST00000617557 69 ntBASIC12.83□□□□□ -0.36
UBA52P62987 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 AC130686.1-201ENST00000622936 2466 ntBASIC12.83□□□□□ -0.36
UBA52P62987 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UBA52P62987 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBA52P62987 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.83□□□□□ -0.36
UBA52P62987 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
UBA52P62987 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
UBA52P62987 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.82□□□□□ -0.36
UBA52P62987 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
UBA52P62987 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.82□□□□□ -0.36
UBA52P62987 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.82□□□□□ -0.36
UBA52P62987 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.82□□□□□ -0.36
UBA52P62987 AC104989.1-201ENST00000519711 778 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms