Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 AL158070.2-201ENST00000623713 1621 ntBASIC12.1□□□□□ -0.47
SPCS3P61009 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SPCS3P61009 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SPCS3P61009 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPCS3P61009 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.1□□□□□ -0.47
SPCS3P61009 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SPCS3P61009 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SPCS3P61009 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 AC089987.1-201ENST00000551654 2209 ntBASIC12.09□□□□□ -0.47
SPCS3P61009 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SPCS3P61009 RPSAP43-201ENST00000402237 625 ntBASIC12.09□□□□□ -0.47
SPCS3P61009 UPF3AP3-201ENST00000420996 769 ntBASIC12.09□□□□□ -0.47
SPCS3P61009 NUS1P3-201ENST00000423502 862 ntBASIC12.09□□□□□ -0.47
SPCS3P61009 CNN2P11-201ENST00000429351 262 ntBASIC12.09□□□□□ -0.47
SPCS3P61009 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.09□□□□□ -0.47
SPCS3P61009 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.09□□□□□ -0.47
SPCS3P61009 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 MEIS3P1-201ENST00000495167 958 ntBASIC12.09□□□□□ -0.47
SPCS3P61009 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.09□□□□□ -0.47
SPCS3P61009 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.09□□□□□ -0.47
SPCS3P61009 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.09□□□□□ -0.47
SPCS3P61009 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.09□□□□□ -0.47
SPCS3P61009 AL596442.2-201ENST00000610240 980 ntBASIC12.09□□□□□ -0.47
SPCS3P61009 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 AC131212.3-201ENST00000624087 4219 ntBASIC12.09□□□□□ -0.47
SPCS3P61009 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPCS3P61009 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.09□□□□□ -0.47
SPCS3P61009 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.09□□□□□ -0.47
SPCS3P61009 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SPCS3P61009 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SPCS3P61009 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.08□□□□□ -0.47
SPCS3P61009 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.08□□□□□ -0.47
SPCS3P61009 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.47
SPCS3P61009 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.08□□□□□ -0.48
SPCS3P61009 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
SPCS3P61009 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SPCS3P61009 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms