Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 AL139010.1-201ENST00000454878 894 ntBASIC13.83□□□□□ -0.2
CDH15P55291 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH15P55291 RNA5SP410-201ENST00000516285 106 ntBASIC13.83□□□□□ -0.2
CDH15P55291 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 ALG1L8P-201ENST00000533887 760 ntBASIC13.83□□□□□ -0.2
CDH15P55291 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.83□□□□□ -0.2
CDH15P55291 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.83□□□□□ -0.2
CDH15P55291 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH15P55291 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CDH15P55291 AC073869.1-201ENST00000415574 2762 ntBASIC13.83□□□□□ -0.2
CDH15P55291 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
CDH15P55291 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH15P55291 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CDH15P55291 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH15P55291 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH15P55291 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CDH15P55291 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH15P55291 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH15P55291 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH15P55291 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH15P55291 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH15P55291 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH15P55291 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH15P55291 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH15P55291 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CDH15P55291 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CDH15P55291 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDH15P55291 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH15P55291 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH15P55291 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 FAM220BP-201ENST00000377689 816 ntBASIC13.82□□□□□ -0.2
CDH15P55291 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH15P55291 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH15P55291 TREML5P-201ENST00000421694 576 ntBASIC13.82□□□□□ -0.2
CDH15P55291 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.82□□□□□ -0.2
CDH15P55291 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH15P55291 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.82□□□□□ -0.2
CDH15P55291 IGHV3-42-201ENST00000520410 361 ntBASIC13.82□□□□□ -0.2
CDH15P55291 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH15P55291 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH15P55291 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 AC190387.1-201ENST00000551683 408 ntBASIC13.82□□□□□ -0.2
CDH15P55291 AL158211.3-201ENST00000607385 239 ntBASIC13.82□□□□□ -0.2
CDH15P55291 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH15P55291 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CDH15P55291 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CDH15P55291 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CDH15P55291 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH15P55291 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH15P55291 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDH15P55291 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH15P55291 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CDH15P55291 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH15P55291 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH15P55291 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH15P55291 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CDH15P55291 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH15P55291 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms