Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.69■□□□□ 0.58
BRPF1P55201 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.69■□□□□ 0.58
BRPF1P55201 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.69■□□□□ 0.58
BRPF1P55201 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.68■□□□□ 0.58
BRPF1P55201 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BRPF1P55201 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.68■□□□□ 0.58
BRPF1P55201 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.68■□□□□ 0.58
BRPF1P55201 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.68■□□□□ 0.58
BRPF1P55201 ST13P19-201ENST00000442505 1124 ntBASIC18.68■□□□□ 0.58
BRPF1P55201 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.68■□□□□ 0.58
BRPF1P55201 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.68■□□□□ 0.58
BRPF1P55201 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.68■□□□□ 0.58
BRPF1P55201 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BRPF1P55201 AC005586.2-201ENST00000563946 837 ntBASIC18.68■□□□□ 0.58
BRPF1P55201 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 MIR3619-201ENST00000579667 83 ntBASIC18.68■□□□□ 0.58
BRPF1P55201 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.68■□□□□ 0.58
BRPF1P55201 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.68■□□□□ 0.58
BRPF1P55201 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BRPF1P55201 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.68■□□□□ 0.58
BRPF1P55201 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BRPF1P55201 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.68■□□□□ 0.58
BRPF1P55201 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 AL008718.2-201ENST00000609206 1313 ntBASIC18.68■□□□□ 0.58
BRPF1P55201 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BRPF1P55201 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BRPF1P55201 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRPF1P55201 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRPF1P55201 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BRPF1P55201 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.67■□□□□ 0.58
BRPF1P55201 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
BRPF1P55201 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.67■□□□□ 0.58
BRPF1P55201 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
BRPF1P55201 AC136759.1-202ENST00000530858 2194 ntBASIC18.67■□□□□ 0.58
BRPF1P55201 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BRPF1P55201 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.67■□□□□ 0.58
BRPF1P55201 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.67■□□□□ 0.58
BRPF1P55201 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.67■□□□□ 0.58
BRPF1P55201 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.67■□□□□ 0.58
BRPF1P55201 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 MIR7845-201ENST00000618396 99 ntBASIC18.67■□□□□ 0.58
BRPF1P55201 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
BRPF1P55201 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
BRPF1P55201 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRPF1P55201 AP002414.2-201ENST00000591780 3365 ntBASIC18.67■□□□□ 0.58
BRPF1P55201 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.67■□□□□ 0.58
BRPF1P55201 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BRPF1P55201 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BRPF1P55201 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.66■□□□□ 0.58
BRPF1P55201 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 AC012617.1-204ENST00000586340 2305 ntBASIC18.66■□□□□ 0.58
BRPF1P55201 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms