Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 MARK2P16-201ENST00000605714 1723 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.27■□□□□ 0.36
CACNB3P54284 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.27■□□□□ 0.36
CACNB3P54284 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.27■□□□□ 0.36
CACNB3P54284 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.27■□□□□ 0.36
CACNB3P54284 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.27■□□□□ 0.36
CACNB3P54284 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 PIN4P1-201ENST00000451079 396 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 AC130709.1-201ENST00000484779 1212 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 RN7SL818P-201ENST00000485099 259 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 ORAOV1P1-201ENST00000503108 395 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 TMCO5B-205ENST00000530020 894 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.27■□□□□ 0.36
CACNB3P54284 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.27■□□□□ 0.36
CACNB3P54284 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 AC005041.3-201ENST00000606287 649 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 RN7SL725P-201ENST00000606439 259 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 AC087392.5-201ENST00000612517 489 ntBASIC17.27■□□□□ 0.36
CACNB3P54284 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNB3P54284 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.27■□□□□ 0.36
CACNB3P54284 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNB3P54284 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNB3P54284 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNB3P54284 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNB3P54284 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.27■□□□□ 0.35
CACNB3P54284 AJ011931.1-201ENST00000618749 2492 ntBASIC17.27■□□□□ 0.35
CACNB3P54284 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNB3P54284 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CACNB3P54284 AC018442.1-201ENST00000421439 2061 ntBASIC17.27■□□□□ 0.35
CACNB3P54284 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNB3P54284 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNB3P54284 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
CACNB3P54284 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CACNB3P54284 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 IL9RP3-201ENST00000442856 1674 ntBASIC17.26■□□□□ 0.35
CACNB3P54284 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNB3P54284 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNB3P54284 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CACNB3P54284 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 HIST2H2BA-201ENST00000412169 381 ntBASIC17.26■□□□□ 0.35
CACNB3P54284 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNB3P54284 AC092580.1-201ENST00000433998 658 ntBASIC17.26■□□□□ 0.35
CACNB3P54284 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNB3P54284 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 AC018463.1-201ENST00000456674 917 ntBASIC17.26■□□□□ 0.35
CACNB3P54284 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.26■□□□□ 0.35
CACNB3P54284 IGHV3-37-201ENST00000518544 340 ntBASIC17.26■□□□□ 0.35
CACNB3P54284 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNB3P54284 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNB3P54284 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
CACNB3P54284 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNB3P54284 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNB3P54284 AC025271.4-201ENST00000621477 1726 ntBASIC17.26■□□□□ 0.35
CACNB3P54284 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNB3P54284 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNB3P54284 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CACNB3P54284 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms