Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 AL357563.1-201ENST00000404728 395 ntBASIC14.49□□□□□ -0.09
LIMK1P53667 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 FAM86KP-201ENST00000509817 987 ntBASIC14.49□□□□□ -0.09
LIMK1P53667 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 MIR3188-201ENST00000583494 85 ntBASIC14.49□□□□□ -0.09
LIMK1P53667 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.49□□□□□ -0.09
LIMK1P53667 AC009560.1-201ENST00000620208 434 ntBASIC14.49□□□□□ -0.09
LIMK1P53667 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.49□□□□□ -0.09
LIMK1P53667 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LIMK1P53667 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK1P53667 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.48□□□□□ -0.09
LIMK1P53667 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LIMK1P53667 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LIMK1P53667 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMK1P53667 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMK1P53667 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMK1P53667 DDX39AP1-201ENST00000445147 1181 ntBASIC14.48□□□□□ -0.09
LIMK1P53667 AL354861.1-201ENST00000445213 355 ntBASIC14.48□□□□□ -0.09
LIMK1P53667 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMK1P53667 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMK1P53667 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 RN7SL470P-201ENST00000583069 259 ntBASIC14.48□□□□□ -0.09
LIMK1P53667 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK1P53667 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK1P53667 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK1P53667 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
LIMK1P53667 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LIMK1P53667 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 C18orf15-201ENST00000623680 2534 ntBASIC14.48□□□□□ -0.09
LIMK1P53667 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK1P53667 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK1P53667 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms