Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.8■□□□□ 0.12
SSR1P43307 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SSR1P43307 LINC02560-201ENST00000596379 459 ntBASIC15.8■□□□□ 0.12
SSR1P43307 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.8■□□□□ 0.12
SSR1P43307 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.8■□□□□ 0.12
SSR1P43307 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SSR1P43307 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
SSR1P43307 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.8■□□□□ 0.12
SSR1P43307 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSR1P43307 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SSR1P43307 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SSR1P43307 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SSR1P43307 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
SSR1P43307 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.79■□□□□ 0.12
SSR1P43307 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.79■□□□□ 0.12
SSR1P43307 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SSR1P43307 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.79■□□□□ 0.12
SSR1P43307 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 KLF2P2-201ENST00000416807 1039 ntBASIC15.79■□□□□ 0.12
SSR1P43307 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.79■□□□□ 0.12
SSR1P43307 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.79■□□□□ 0.12
SSR1P43307 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 AC114812.1-204ENST00000449669 728 ntBASIC15.79■□□□□ 0.12
SSR1P43307 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SSR1P43307 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.79■□□□□ 0.12
SSR1P43307 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 AC008494.3-201ENST00000606615 944 ntBASIC15.79■□□□□ 0.12
SSR1P43307 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SSR1P43307 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.79■□□□□ 0.12
SSR1P43307 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.79■□□□□ 0.12
SSR1P43307 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSR1P43307 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.79■□□□□ 0.12
SSR1P43307 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
SSR1P43307 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SSR1P43307 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.78■□□□□ 0.12
SSR1P43307 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC15.78■□□□□ 0.12
SSR1P43307 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.78■□□□□ 0.12
SSR1P43307 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.78■□□□□ 0.12
SSR1P43307 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.78■□□□□ 0.12
SSR1P43307 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.78■□□□□ 0.12
SSR1P43307 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.78■□□□□ 0.12
SSR1P43307 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.78■□□□□ 0.12
SSR1P43307 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.78■□□□□ 0.12
SSR1P43307 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.78■□□□□ 0.12
SSR1P43307 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SSR1P43307 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSR1P43307 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.78■□□□□ 0.12
SSR1P43307 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.78■□□□□ 0.12
SSR1P43307 PRSS30P-206ENST00000641773 873 ntBASIC15.78■□□□□ 0.12
SSR1P43307 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms