Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCT6AP40227 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCT6AP40227 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCT6AP40227 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCT6AP40227 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCT6AP40227 HSPA7-201ENST00000445535 1927 ntBASIC16.7■□□□□ 0.26
CCT6AP40227 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCT6AP40227 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCT6AP40227 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCT6AP40227 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCT6AP40227 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CCT6AP40227 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCT6AP40227 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCT6AP40227 MRPL37P1-201ENST00000592451 1337 ntBASIC16.7■□□□□ 0.26
CCT6AP40227 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.7■□□□□ 0.26
CCT6AP40227 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.69■□□□□ 0.26
CCT6AP40227 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CCT6AP40227 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCT6AP40227 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCT6AP40227 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 KRT8P4-201ENST00000509735 1454 ntBASIC16.69■□□□□ 0.26
CCT6AP40227 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.69■□□□□ 0.26
CCT6AP40227 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.69■□□□□ 0.26
CCT6AP40227 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.69■□□□□ 0.26
CCT6AP40227 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.69■□□□□ 0.26
CCT6AP40227 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.69■□□□□ 0.26
CCT6AP40227 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCT6AP40227 AC023310.1-201ENST00000554836 735 ntBASIC16.69■□□□□ 0.26
CCT6AP40227 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.69■□□□□ 0.26
CCT6AP40227 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.69■□□□□ 0.26
CCT6AP40227 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.69■□□□□ 0.26
CCT6AP40227 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.69■□□□□ 0.26
CCT6AP40227 MIR6805-201ENST00000615055 62 ntBASIC16.69■□□□□ 0.26
CCT6AP40227 AC008687.7-202ENST00000637404 953 ntBASIC16.69■□□□□ 0.26
CCT6AP40227 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.69■□□□□ 0.26
CCT6AP40227 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCT6AP40227 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.69■□□□□ 0.26
CCT6AP40227 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.69■□□□□ 0.26
CCT6AP40227 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCT6AP40227 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCT6AP40227 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCT6AP40227 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCT6AP40227 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.68■□□□□ 0.26
CCT6AP40227 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CCT6AP40227 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.68■□□□□ 0.26
CCT6AP40227 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.68■□□□□ 0.26
CCT6AP40227 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCT6AP40227 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCT6AP40227 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CCT6AP40227 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.68■□□□□ 0.26
CCT6AP40227 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 AC099336.1-201ENST00000417053 1171 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.68■□□□□ 0.26
CCT6AP40227 HLA-V-201ENST00000429037 534 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 ATP5G2P4-201ENST00000442175 420 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 CSF2RBP1-201ENST00000447905 391 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 KRT223P-202ENST00000449164 1292 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.68■□□□□ 0.26
CCT6AP40227 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.68■□□□□ 0.26
CCT6AP40227 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.68■□□□□ 0.26
CCT6AP40227 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.68■□□□□ 0.26
CCT6AP40227 C2orf69P2-201ENST00000562032 1123 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 AP005482.1-201ENST00000563722 1273 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 PPY2P-201ENST00000582808 702 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 MIR4259-201ENST00000584466 101 ntBASIC16.68■□□□□ 0.26
CCT6AP40227 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.68■□□□□ 0.26
CCT6AP40227 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCT6AP40227 COX11-210ENST00000639671 696 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms