Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRIM23P36406 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.45□□□□□ -0.1
TRIM23P36406 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM23P36406 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM23P36406 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
TRIM23P36406 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM23P36406 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM23P36406 AC003686.1-201ENST00000550956 1034 ntBASIC14.45□□□□□ -0.1
TRIM23P36406 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM23P36406 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.45□□□□□ -0.1
TRIM23P36406 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM23P36406 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM23P36406 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
TRIM23P36406 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.45□□□□□ -0.1
TRIM23P36406 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM23P36406 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 AC008132.1-202ENST00000342005 1389 ntBASIC14.45□□□□□ -0.1
TRIM23P36406 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM23P36406 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM23P36406 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRIM23P36406 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM23P36406 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM23P36406 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 AHCYP4-201ENST00000419201 1315 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 MTHFR-210ENST00000641407 2387 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM23P36406 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRIM23P36406 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM23P36406 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 KRT18P36-201ENST00000411618 1276 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 ACTG1P2-201ENST00000415776 1125 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 ACTG1P11-201ENST00000425411 1125 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 ST13P19-201ENST00000442505 1124 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 RN7SL11P-201ENST00000471305 293 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 AC024681.1-201ENST00000521917 487 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM23P36406 CHMP4BP1-201ENST00000556017 588 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM23P36406 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.44□□□□□ -0.1
TRIM23P36406 NAP1L6-202ENST00000641404 1222 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 AGGF1P1-201ENST00000509500 2073 ntBASIC14.44□□□□□ -0.1
TRIM23P36406 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRIM23P36406 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM23P36406 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM23P36406 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRIM23P36406 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM23P36406 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRIM23P36406 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRIM23P36406 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM23P36406 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM23P36406 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM23P36406 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
TRIM23P36406 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms