Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.75■□□□□ 0.11
HOXC8P31273 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.75■□□□□ 0.11
HOXC8P31273 RN7SKP109-201ENST00000410592 316 ntBASIC15.75■□□□□ 0.11
HOXC8P31273 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.75■□□□□ 0.11
HOXC8P31273 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HOXC8P31273 AC004837.1-201ENST00000446267 564 ntBASIC15.75■□□□□ 0.11
HOXC8P31273 SCARNA12-201ENST00000459155 270 ntBASIC15.75■□□□□ 0.11
HOXC8P31273 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.75■□□□□ 0.11
HOXC8P31273 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.75■□□□□ 0.11
HOXC8P31273 AC005740.1-201ENST00000515639 522 ntBASIC15.75■□□□□ 0.11
HOXC8P31273 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HOXC8P31273 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.75■□□□□ 0.11
HOXC8P31273 RN7SL357P-201ENST00000581065 298 ntBASIC15.75■□□□□ 0.11
HOXC8P31273 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.75■□□□□ 0.11
HOXC8P31273 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.75■□□□□ 0.11
HOXC8P31273 AL021707.6-201ENST00000609212 491 ntBASIC15.75■□□□□ 0.11
HOXC8P31273 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HOXC8P31273 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HOXC8P31273 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HOXC8P31273 OR6D1P-203ENST00000641209 4860 ntBASIC15.75■□□□□ 0.11
HOXC8P31273 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
HOXC8P31273 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HOXC8P31273 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.75■□□□□ 0.11
HOXC8P31273 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HOXC8P31273 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.74■□□□□ 0.11
HOXC8P31273 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.74■□□□□ 0.11
HOXC8P31273 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 SHMT1P1-201ENST00000419974 1312 ntBASIC15.74■□□□□ 0.11
HOXC8P31273 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 MTHFR-210ENST00000641407 2387 ntBASIC15.74■□□□□ 0.11
HOXC8P31273 RNVU1-8-201ENST00000364272 125 ntBASIC15.74■□□□□ 0.11
HOXC8P31273 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 AC006987.1-201ENST00000413610 527 ntBASIC15.74■□□□□ 0.11
HOXC8P31273 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.74■□□□□ 0.11
HOXC8P31273 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.74■□□□□ 0.11
HOXC8P31273 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 RPL35P9-201ENST00000446059 350 ntBASIC15.74■□□□□ 0.11
HOXC8P31273 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.74■□□□□ 0.11
HOXC8P31273 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.74■□□□□ 0.11
HOXC8P31273 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.74■□□□□ 0.11
HOXC8P31273 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HOXC8P31273 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.74■□□□□ 0.11
HOXC8P31273 AC022447.6-201ENST00000515522 438 ntBASIC15.74■□□□□ 0.11
HOXC8P31273 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HOXC8P31273 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.74■□□□□ 0.11
HOXC8P31273 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.74■□□□□ 0.11
HOXC8P31273 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HOXC8P31273 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HOXC8P31273 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HOXC8P31273 HYMAI-201ENST00000635591 3347 ntBASIC15.74■□□□□ 0.11
HOXC8P31273 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HOXC8P31273 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HOXC8P31273 CICP14-201ENST00000629111 2732 ntBASIC15.74■□□□□ 0.11
HOXC8P31273 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HOXC8P31273 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.73■□□□□ 0.11
HOXC8P31273 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 LINC00115-201ENST00000473798 1317 ntBASIC15.73■□□□□ 0.11
HOXC8P31273 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 AC007952.5-201ENST00000572818 1486 ntBASIC15.73■□□□□ 0.11
HOXC8P31273 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HOXC8P31273 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.73■□□□□ 0.11
HOXC8P31273 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms