Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VARSP26640 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
VARSP26640 AC114812.1-204ENST00000449669 728 ntBASIC14.61□□□□□ -0.07
VARSP26640 AC093433.1-201ENST00000458048 571 ntBASIC14.61□□□□□ -0.07
VARSP26640 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.61□□□□□ -0.07
VARSP26640 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.61□□□□□ -0.07
VARSP26640 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.61□□□□□ -0.07
VARSP26640 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.61□□□□□ -0.07
VARSP26640 AP001063.1-201ENST00000568332 529 ntBASIC14.61□□□□□ -0.07
VARSP26640 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.61□□□□□ -0.07
VARSP26640 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.61□□□□□ -0.07
VARSP26640 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.61□□□□□ -0.07
VARSP26640 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 AC008735.3-201ENST00000596646 500 ntBASIC14.61□□□□□ -0.07
VARSP26640 AC233724.13-201ENST00000598383 410 ntBASIC14.61□□□□□ -0.07
VARSP26640 AC137695.1-201ENST00000604126 489 ntBASIC14.61□□□□□ -0.07
VARSP26640 AP005019.2-201ENST00000615104 511 ntBASIC14.61□□□□□ -0.07
VARSP26640 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VARSP26640 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.61□□□□□ -0.07
VARSP26640 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VARSP26640 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VARSP26640 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.61□□□□□ -0.07
VARSP26640 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VARSP26640 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VARSP26640 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 AC005562.1-201ENST00000583030 3219 ntBASIC14.6□□□□□ -0.07
VARSP26640 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.6□□□□□ -0.07
VARSP26640 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.6□□□□□ -0.07
VARSP26640 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.6□□□□□ -0.07
VARSP26640 ACTBP11-201ENST00000436287 1126 ntBASIC14.6□□□□□ -0.07
VARSP26640 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.6□□□□□ -0.07
VARSP26640 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 AL606495.2-201ENST00000605867 535 ntBASIC14.6□□□□□ -0.07
VARSP26640 AC084346.2-201ENST00000607097 949 ntBASIC14.6□□□□□ -0.07
VARSP26640 AL022328.1-201ENST00000610050 478 ntBASIC14.6□□□□□ -0.07
VARSP26640 MIR6775-201ENST00000617557 69 ntBASIC14.6□□□□□ -0.07
VARSP26640 RPSAP52-203ENST00000622976 1023 ntBASIC14.6□□□□□ -0.07
VARSP26640 AC092723.2-201ENST00000624955 793 ntBASIC14.6□□□□□ -0.07
VARSP26640 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.6□□□□□ -0.07
VARSP26640 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.6□□□□□ -0.07
VARSP26640 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms