Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 AC004623.1-201ENST00000624592 2127 ntBASIC12.37□□□□□ -0.43
CXCL3P19876 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 AC004870.1-201ENST00000315132 882 ntBASIC12.37□□□□□ -0.43
CXCL3P19876 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.37□□□□□ -0.43
CXCL3P19876 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 RHOQP3-201ENST00000437982 621 ntBASIC12.37□□□□□ -0.43
CXCL3P19876 FAAHP1-202ENST00000446499 1238 ntBASIC12.37□□□□□ -0.43
CXCL3P19876 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.37□□□□□ -0.43
CXCL3P19876 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 AL691432.3-201ENST00000621860 400 ntBASIC12.37□□□□□ -0.43
CXCL3P19876 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 AC010507.1-201ENST00000633895 436 ntBASIC12.37□□□□□ -0.43
CXCL3P19876 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.37□□□□□ -0.43
CXCL3P19876 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CXCL3P19876 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CXCL3P19876 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CXCL3P19876 KRT8P35-201ENST00000483942 1338 ntBASIC12.37□□□□□ -0.43
CXCL3P19876 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CXCL3P19876 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.36□□□□□ -0.43
CXCL3P19876 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 AL731571.1-201ENST00000617058 5428 ntBASIC12.36□□□□□ -0.43
CXCL3P19876 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.36□□□□□ -0.43
CXCL3P19876 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CXCL3P19876 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.36□□□□□ -0.43
CXCL3P19876 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL3P19876 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 AL031284.1-201ENST00000419297 478 ntBASIC12.36□□□□□ -0.43
CXCL3P19876 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.36□□□□□ -0.43
CXCL3P19876 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
CXCL3P19876 AC098831.1-202ENST00000438821 336 ntBASIC12.36□□□□□ -0.43
CXCL3P19876 VN2R19P-201ENST00000442399 1052 ntBASIC12.36□□□□□ -0.43
CXCL3P19876 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.36□□□□□ -0.43
CXCL3P19876 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
CXCL3P19876 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms