Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 BNIP3P29-201ENST00000598302 571 ntBASIC16.2■□□□□ 0.18
GAP43P17677 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.2■□□□□ 0.18
GAP43P17677 MIR6720-201ENST00000611664 98 ntBASIC16.2■□□□□ 0.18
GAP43P17677 AC011447.5-201ENST00000616168 564 ntBASIC16.2■□□□□ 0.18
GAP43P17677 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAP43P17677 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
GAP43P17677 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.2■□□□□ 0.18
GAP43P17677 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAP43P17677 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GAP43P17677 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAP43P17677 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GAP43P17677 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.2■□□□□ 0.18
GAP43P17677 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAP43P17677 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.2■□□□□ 0.18
GAP43P17677 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GAP43P17677 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GAP43P17677 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAP43P17677 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.2■□□□□ 0.18
GAP43P17677 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAP43P17677 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAP43P17677 AC064801.2-201ENST00000625052 1303 ntBASIC16.19■□□□□ 0.18
GAP43P17677 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GAP43P17677 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.19■□□□□ 0.18
GAP43P17677 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
GAP43P17677 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 AC011498.7-201ENST00000624986 2027 ntBASIC16.19■□□□□ 0.18
GAP43P17677 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.19■□□□□ 0.18
GAP43P17677 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.19■□□□□ 0.18
GAP43P17677 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GAP43P17677 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.19■□□□□ 0.18
GAP43P17677 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.19■□□□□ 0.18
GAP43P17677 AL157407.1-201ENST00000435784 904 ntBASIC16.19■□□□□ 0.18
GAP43P17677 Z93015.1-201ENST00000451718 390 ntBASIC16.19■□□□□ 0.18
GAP43P17677 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.19■□□□□ 0.18
GAP43P17677 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.19■□□□□ 0.18
GAP43P17677 MIR4783-201ENST00000580343 82 ntBASIC16.19■□□□□ 0.18
GAP43P17677 AC009542.2-202ENST00000619004 1067 ntBASIC16.19■□□□□ 0.18
GAP43P17677 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 AC068418.2-201ENST00000577309 3703 ntBASIC16.19■□□□□ 0.18
GAP43P17677 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
GAP43P17677 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.19■□□□□ 0.18
GAP43P17677 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.19■□□□□ 0.18
GAP43P17677 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAP43P17677 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 AC244394.1-201ENST00000435000 1665 ntBASIC16.18■□□□□ 0.18
GAP43P17677 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.18■□□□□ 0.18
GAP43P17677 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 AC020910.6-201ENST00000623084 1459 ntBASIC16.18■□□□□ 0.18
GAP43P17677 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 AL645933.1-201ENST00000440087 609 ntBASIC16.18■□□□□ 0.18
GAP43P17677 MTX1P1-201ENST00000440904 838 ntBASIC16.18■□□□□ 0.18
GAP43P17677 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.18■□□□□ 0.18
GAP43P17677 AC100827.2-201ENST00000563214 1194 ntBASIC16.18■□□□□ 0.18
GAP43P17677 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
GAP43P17677 AL162426.1-201ENST00000624141 743 ntBASIC16.18■□□□□ 0.18
GAP43P17677 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.18■□□□□ 0.18
GAP43P17677 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.18■□□□□ 0.18
GAP43P17677 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GAP43P17677 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.18■□□□□ 0.18
GAP43P17677 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms