Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 KRT18P28-201ENST00000453838 1332 ntBASIC13□□□□□ -0.33
UBCP0CG48 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 OSM-203ENST00000403463 464 ntTSL 3 BASIC13□□□□□ -0.33
UBCP0CG48 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 KLF2P2-201ENST00000416807 1039 ntBASIC13□□□□□ -0.33
UBCP0CG48 PON3-203ENST00000427422 894 ntTSL 3 BASIC13□□□□□ -0.33
UBCP0CG48 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13□□□□□ -0.33
UBCP0CG48 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13□□□□□ -0.33
UBCP0CG48 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13□□□□□ -0.33
UBCP0CG48 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13□□□□□ -0.33
UBCP0CG48 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13□□□□□ -0.33
UBCP0CG48 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UBCP0CG48 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UBCP0CG48 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
UBCP0CG48 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13□□□□□ -0.33
UBCP0CG48 PEG13-201ENST00000631594 5667 ntBASIC12.99□□□□□ -0.33
UBCP0CG48 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 AL031595.1-201ENST00000623969 4709 ntBASIC12.99□□□□□ -0.33
UBCP0CG48 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UBCP0CG48 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.99□□□□□ -0.33
UBCP0CG48 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 AC003102.2-201ENST00000589195 1469 ntBASIC12.99□□□□□ -0.33
UBCP0CG48 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UBCP0CG48 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UBCP0CG48 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UBCP0CG48 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 BASP1P1-201ENST00000430708 665 ntBASIC12.99□□□□□ -0.33
UBCP0CG48 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.99□□□□□ -0.33
UBCP0CG48 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.99□□□□□ -0.33
UBCP0CG48 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.99□□□□□ -0.33
UBCP0CG48 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.99□□□□□ -0.33
UBCP0CG48 AC004790.1-201ENST00000612686 536 ntBASIC12.99□□□□□ -0.33
UBCP0CG48 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.99□□□□□ -0.33
UBCP0CG48 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UBCP0CG48 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
UBCP0CG48 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.99□□□□□ -0.33
UBCP0CG48 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UBCP0CG48 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
UBCP0CG48 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 RN7SL832P-201ENST00000607781 1756 ntBASIC12.99□□□□□ -0.33
UBCP0CG48 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBCP0CG48 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms