Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.35□□□□□ -0.11
LINGO3P0C6S8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINGO3P0C6S8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINGO3P0C6S8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.35□□□□□ -0.11
LINGO3P0C6S8 AC134407.3-201ENST00000624035 2139 ntBASIC14.35□□□□□ -0.11
LINGO3P0C6S8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINGO3P0C6S8 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINGO3P0C6S8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 MRPS18AP1-201ENST00000414458 589 ntBASIC14.34□□□□□ -0.11
LINGO3P0C6S8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 SLED1-202ENST00000512051 380 ntBASIC14.34□□□□□ -0.11
LINGO3P0C6S8 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 MIR497HG-202ENST00000572453 3838 ntBASIC14.34□□□□□ -0.11
LINGO3P0C6S8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINGO3P0C6S8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINGO3P0C6S8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINGO3P0C6S8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINGO3P0C6S8 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 AC114501.2-201ENST00000439631 535 ntBASIC14.33□□□□□ -0.12
LINGO3P0C6S8 RPL13P2-201ENST00000440687 659 ntBASIC14.33□□□□□ -0.12
LINGO3P0C6S8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 AL355385.1-201ENST00000606123 409 ntBASIC14.33□□□□□ -0.12
LINGO3P0C6S8 AC008738.7-201ENST00000609744 511 ntBASIC14.33□□□□□ -0.12
LINGO3P0C6S8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 AP000437.1-201ENST00000624057 2085 ntBASIC14.33□□□□□ -0.12
LINGO3P0C6S8 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINGO3P0C6S8 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LINGO3P0C6S8 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms