Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.52■□□□□ 0.07
LMNAP02545 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
LMNAP02545 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
LMNAP02545 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LMNAP02545 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.52■□□□□ 0.07
LMNAP02545 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
LMNAP02545 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LMNAP02545 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LMNAP02545 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LMNAP02545 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 AC079781.5-202ENST00000641784 3743 ntBASIC15.51■□□□□ 0.07
LMNAP02545 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LMNAP02545 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.51■□□□□ 0.07
LMNAP02545 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
LMNAP02545 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 NUP210P1-202ENST00000504322 710 ntBASIC15.51■□□□□ 0.07
LMNAP02545 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.51■□□□□ 0.07
LMNAP02545 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.51■□□□□ 0.07
LMNAP02545 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.51■□□□□ 0.07
LMNAP02545 AC000095.1-201ENST00000603208 874 ntBASIC15.51■□□□□ 0.07
LMNAP02545 COX6A1P2-201ENST00000620597 330 ntBASIC15.51■□□□□ 0.07
LMNAP02545 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LMNAP02545 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.51■□□□□ 0.07
LMNAP02545 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LMNAP02545 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.5■□□□□ 0.07
LMNAP02545 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.5■□□□□ 0.07
LMNAP02545 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.5■□□□□ 0.07
LMNAP02545 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LMNAP02545 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.5■□□□□ 0.07
LMNAP02545 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 KRT8P35-201ENST00000483942 1338 ntBASIC15.5■□□□□ 0.07
LMNAP02545 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.5■□□□□ 0.07
LMNAP02545 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LMNAP02545 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.5■□□□□ 0.07
LMNAP02545 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.5■□□□□ 0.07
LMNAP02545 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.5■□□□□ 0.07
LMNAP02545 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.5■□□□□ 0.07
LMNAP02545 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 CNN2P10-201ENST00000443067 918 ntBASIC15.5■□□□□ 0.07
LMNAP02545 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.5■□□□□ 0.07
LMNAP02545 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LMNAP02545 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.5■□□□□ 0.07
LMNAP02545 AC024681.1-201ENST00000521917 487 ntBASIC15.5■□□□□ 0.07
LMNAP02545 RN7SL574P-201ENST00000581512 297 ntBASIC15.5■□□□□ 0.07
LMNAP02545 AC244157.2-201ENST00000616239 1006 ntBASIC15.5■□□□□ 0.07
LMNAP02545 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LMNAP02545 AC136759.1-202ENST00000530858 2194 ntBASIC15.5■□□□□ 0.07
LMNAP02545 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.5■□□□□ 0.07
LMNAP02545 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LMNAP02545 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LMNAP02545 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms