Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 SOCS2P1-201ENST00000417727 557 ntBASIC15.68■□□□□ 0.1
RCCD1A6NED2 PMS2P2-201ENST00000425039 1128 ntBASIC15.68■□□□□ 0.1
RCCD1A6NED2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.68■□□□□ 0.1
RCCD1A6NED2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AL391001.1-201ENST00000602747 715 ntBASIC15.68■□□□□ 0.1
RCCD1A6NED2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 TMEM14EP-202ENST00000639378 1296 ntBASIC15.68■□□□□ 0.1
RCCD1A6NED2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.68■□□□□ 0.1
RCCD1A6NED2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCCD1A6NED2 AC009093.2-202ENST00000620513 2079 ntBASIC15.67■□□□□ 0.1
RCCD1A6NED2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 AC108673.2-201ENST00000608909 565 ntBASIC15.67■□□□□ 0.1
RCCD1A6NED2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCCD1A6NED2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RCCD1A6NED2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RCCD1A6NED2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RCCD1A6NED2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 294.8 ms