Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 AL109936.8-201ENST00000641772 604 ntBASIC16.09■□□□□ 0.17
CCDC66A2RUB6 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC66A2RUB6 DNM1P41-201ENST00000623634 3350 ntBASIC16.08■□□□□ 0.17
CCDC66A2RUB6 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 CNN2P2-201ENST00000443536 909 ntBASIC16.08■□□□□ 0.16
CCDC66A2RUB6 CNN2P3-201ENST00000450201 906 ntBASIC16.08■□□□□ 0.16
CCDC66A2RUB6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 SAMD11P1-201ENST00000571429 661 ntBASIC16.08■□□□□ 0.16
CCDC66A2RUB6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 AL136317.3-201ENST00000618497 906 ntBASIC16.08■□□□□ 0.16
CCDC66A2RUB6 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.08■□□□□ 0.16
CCDC66A2RUB6 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC66A2RUB6 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms