Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 LILRP1-201ENST00000444199 1370 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 INTS4P1-203ENST00000641008 3683 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA1Q9UND3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 CLUHP2-201ENST00000426660 1303 ntBASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 AL360270.3-201ENST00000609118 1348 ntBASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 AC100850.1-201ENST00000506768 649 ntBASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 AP003171.2-201ENST00000528208 925 ntBASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA1Q9UND3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
NPIPA1Q9UND3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
NPIPA1Q9UND3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NPIPA1Q9UND3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms