Protein–RNA interactions for Protein: Q9P2J3

KLHL9, Kelch-like protein 9, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL9Q9P2J3 AP005482.1-201ENST00000563722 1273 ntBASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 AL137783.1-201ENST00000623494 1896 ntBASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLHL9Q9P2J3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 CTBP2P5-201ENST00000454986 1264 ntBASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 AP000812.2-201ENST00000538934 718 ntBASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 AC133552.6-201ENST00000613406 534 ntBASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 ENPP7P14-201ENST00000621765 1040 ntBASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 RHOXF1P1-202ENST00000635473 501 ntBASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 AL928921.2-201ENST00000641325 2442 ntBASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 AC079781.5-202ENST00000641784 3743 ntBASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLHL9Q9P2J3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 MIR1909-201ENST00000411312 80 ntBASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 CNN2P8-201ENST00000421872 913 ntBASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.48□□□□□ -0.25
KLHL9Q9P2J3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms