Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AL162426.1-201ENST00000624141 743 ntBASIC15.68■□□□□ 0.1
CISHQ9NSE2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AC011498.7-201ENST00000624986 2027 ntBASIC15.68■□□□□ 0.1
CISHQ9NSE2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 BTBD6P1-201ENST00000412176 1267 ntBASIC15.67■□□□□ 0.1
CISHQ9NSE2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 MIR6720-201ENST00000611664 98 ntBASIC15.67■□□□□ 0.1
CISHQ9NSE2 AL096828.3-201ENST00000615354 462 ntBASIC15.67■□□□□ 0.1
CISHQ9NSE2 AL033527.4-201ENST00000641026 673 ntBASIC15.67■□□□□ 0.1
CISHQ9NSE2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 SNX18-202ENST00000343017 3140 ntBASIC15.67■□□□□ 0.1
CISHQ9NSE2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CISHQ9NSE2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.67■□□□□ 0.1
CISHQ9NSE2 OR2I1P-209ENST00000641730 5365 ntBASIC15.67■□□□□ 0.1
CISHQ9NSE2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 AC012617.1-204ENST00000586340 2305 ntBASIC15.66■□□□□ 0.1
CISHQ9NSE2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 AL157407.1-201ENST00000435784 904 ntBASIC15.66■□□□□ 0.1
CISHQ9NSE2 AL645933.1-201ENST00000440087 609 ntBASIC15.66■□□□□ 0.1
CISHQ9NSE2 KLF2P1-201ENST00000447438 1042 ntBASIC15.66■□□□□ 0.1
CISHQ9NSE2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CISHQ9NSE2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 AC027237.1-201ENST00000560942 655 ntBASIC15.66■□□□□ 0.1
CISHQ9NSE2 AC100827.2-201ENST00000563214 1194 ntBASIC15.66■□□□□ 0.1
CISHQ9NSE2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 MIR6752-201ENST00000618442 71 ntBASIC15.66■□□□□ 0.1
CISHQ9NSE2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.66■□□□□ 0.1
CISHQ9NSE2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms