Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF3BQ9BZI7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UPF3BQ9BZI7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.64■□□□□ 0.41
UPF3BQ9BZI7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 ACTG1P3-201ENST00000431775 1114 ntBASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 AC138466.3-201ENST00000619983 221 ntBASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF3BQ9BZI7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 MESTP3-201ENST00000503460 968 ntBASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 AC068587.3-201ENST00000526613 355 ntBASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 AL162274.1-201ENST00000617191 1098 ntBASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 ENPP7P14-201ENST00000621765 1040 ntBASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF3BQ9BZI7 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms