Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AC103702.1-201ENST00000548801 2630 ntBASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AC079112.1-201ENST00000454972 939 ntBASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 DUX4L50-201ENST00000455245 715 ntBASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AC084781.1-201ENST00000613737 656 ntBASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AP001065.2-201ENST00000617205 644 ntBASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 AC009560.1-201ENST00000620208 434 ntBASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC22.36■■□□□ 1.17
CCNB3Q8WWL7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 MRPL22P1-201ENST00000505398 616 ntBASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNB3Q8WWL7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 AL627389.1-201ENST00000413508 1182 ntBASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 RN7SL81P-201ENST00000493781 261 ntBASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 ORAOV1P1-201ENST00000503108 395 ntBASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 CTBP2P4-201ENST00000513884 920 ntBASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 TMCO5B-205ENST00000530020 894 ntBASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 AC027237.1-201ENST00000560942 655 ntBASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 AC025262.2-201ENST00000623975 1056 ntBASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNB3Q8WWL7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms