Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 SDHAP3-202ENST00000515467 728 ntBASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 AC027796.2-201ENST00000575326 344 ntBASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB3IL1Q8TBN0 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 AC005562.1-201ENST00000583030 3219 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 RPL37AP1-201ENST00000412502 279 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 KRT8P14-201ENST00000414254 1442 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 KRT18P28-201ENST00000453838 1332 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 KRT8P35-201ENST00000483942 1338 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 COL6A4P2-202ENST00000504443 2753 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 AC023794.5-201ENST00000564380 2157 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 MIR6080-201ENST00000617359 66 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 AL158070.2-201ENST00000623713 1621 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 AC009093.7-201ENST00000623853 1223 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB3IL1Q8TBN0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 AC004899.2-201ENST00000622993 3860 ntBASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB3IL1Q8TBN0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms