Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 AC004945.1-201ENST00000416738 983 ntBASIC15.06■□□□□ 0
CFAP61Q8NHU2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 TMEM198B-204ENST00000484016 896 ntBASIC15.06■□□□□ 0
CFAP61Q8NHU2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 AC004066.1-201ENST00000502488 802 ntBASIC15.06■□□□□ 0
CFAP61Q8NHU2 AC026410.3-201ENST00000514280 936 ntBASIC15.06■□□□□ 0
CFAP61Q8NHU2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 SPDYE22P-201ENST00000582158 798 ntBASIC15.06■□□□□ 0
CFAP61Q8NHU2 AC027307.3-201ENST00000594262 1100 ntBASIC15.06■□□□□ 0
CFAP61Q8NHU2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.06■□□□□ 0
CFAP61Q8NHU2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 AL138799.1-201ENST00000448213 1675 ntBASIC15.06■□□□□ 0
CFAP61Q8NHU2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CFAP61Q8NHU2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CFAP61Q8NHU2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CFAP61Q8NHU2 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.05■□□□□ 0
CFAP61Q8NHU2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.05■□□□□ 0
CFAP61Q8NHU2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CFAP61Q8NHU2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CFAP61Q8NHU2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.05■□□□□ 0
CFAP61Q8NHU2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.05■□□□□ 0
CFAP61Q8NHU2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.05■□□□□ 0
CFAP61Q8NHU2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CFAP61Q8NHU2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
CFAP61Q8NHU2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.05■□□□□ 0
CFAP61Q8NHU2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 AL442647.2-201ENST00000429864 857 ntBASIC15.05■□□□□ -0
CFAP61Q8NHU2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 AP001582.1-201ENST00000525856 295 ntBASIC15.05■□□□□ -0
CFAP61Q8NHU2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 WFDC1-204ENST00000613603 549 ntBASIC15.05■□□□□ -0
CFAP61Q8NHU2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CFAP61Q8NHU2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CFAP61Q8NHU2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CFAP61Q8NHU2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CFAP61Q8NHU2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms