Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 HMGN1P19-201ENST00000436976 333 ntBASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 AC004466.1-201ENST00000599515 1080 ntBASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF439Q8NDP4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 AC015802.1-201ENST00000588104 1449 ntBASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 MSTO2P-201ENST00000314835 1709 ntBASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 AC003102.2-201ENST00000589195 1469 ntBASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 AC005840.4-201ENST00000541242 2494 ntBASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 TLE1P1-201ENST00000422965 589 ntBASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ACTG1P3-201ENST00000431775 1114 ntBASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 AC012441.1-201ENST00000446669 685 ntBASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF439Q8NDP4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms