Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 PIFO-201ENST00000369737 746 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 PGAM1P11-201ENST00000416729 680 ntBASIC18.09■□□□□ 0.49
COL23A1Q86Y22 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 BCL2L12P1-201ENST00000508390 733 ntBASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AL132994.1-201ENST00000554098 400 ntBASIC18.09■□□□□ 0.49
COL23A1Q86Y22 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 MED11-202ENST00000573708 802 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AP005264.5-201ENST00000590066 467 ntBASIC18.09■□□□□ 0.49
COL23A1Q86Y22 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC18.09■□□□□ 0.49
COL23A1Q86Y22 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL23A1Q86Y22 ODCP-201ENST00000459650 1639 ntBASIC18.09■□□□□ 0.49
COL23A1Q86Y22 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 C18orf15-201ENST00000623680 2534 ntBASIC18.08■□□□□ 0.49
COL23A1Q86Y22 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 FKBP4P8-201ENST00000610931 1369 ntBASIC18.08■□□□□ 0.49
COL23A1Q86Y22 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL23A1Q86Y22 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 OR10N1P-201ENST00000392758 869 ntBASIC18.08■□□□□ 0.48
COL23A1Q86Y22 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 KRT18P4-201ENST00000422599 1288 ntBASIC18.08■□□□□ 0.48
COL23A1Q86Y22 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 EEF1GP8-201ENST00000506566 1154 ntBASIC18.08■□□□□ 0.48
COL23A1Q86Y22 SEPHS2P1-201ENST00000511618 1162 ntBASIC18.08■□□□□ 0.48
COL23A1Q86Y22 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 AL009176.1-201ENST00000607876 650 ntBASIC18.08■□□□□ 0.48
COL23A1Q86Y22 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL23A1Q86Y22 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 PSAT1P2-201ENST00000426107 972 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms