Protein–RNA interactions for Protein: Q3B7S5

SMIM21, Small integral membrane protein 21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM21Q3B7S5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 AC131212.3-201ENST00000624087 4219 ntBASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM21Q3B7S5 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 BOLA2P3-201ENST00000404566 256 ntBASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 FAM8A4P-201ENST00000435433 1213 ntBASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AL590640.2-201ENST00000457038 527 ntBASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AC007551.1-201ENST00000457394 519 ntBASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 KRT90P-201ENST00000549264 1064 ntBASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AC007191.1-201ENST00000623179 2995 ntBASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AC005089.1-201ENST00000619486 2241 ntBASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AC015802.1-201ENST00000588104 1449 ntBASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM21Q3B7S5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 AC087386.2-201ENST00000623212 4637 ntBASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 RN7SKP175-201ENST00000408472 289 ntBASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 FAM197Y7-201ENST00000432892 766 ntBASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 ALG3P1-201ENST00000508806 1114 ntBASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 AC106820.3-201ENST00000561653 397 ntBASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 OR10B1P-201ENST00000601666 907 ntBASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 LINC02084-201ENST00000606069 1096 ntBASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM21Q3B7S5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms