Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 VDAC1P1-201ENST00000439229 848 ntBASIC12.89□□□□□ -0.35
FOXG1P55316 AC004898.1-201ENST00000451057 766 ntBASIC12.89□□□□□ -0.35
FOXG1P55316 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
FOXG1P55316 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.89□□□□□ -0.35
FOXG1P55316 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
FOXG1P55316 AL160314.3-201ENST00000556041 767 ntBASIC12.89□□□□□ -0.35
FOXG1P55316 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.89□□□□□ -0.35
FOXG1P55316 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.89□□□□□ -0.35
FOXG1P55316 MIR6787-201ENST00000616675 61 ntBASIC12.89□□□□□ -0.35
FOXG1P55316 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.89□□□□□ -0.35
FOXG1P55316 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 AC020907.1-201ENST00000616460 1350 ntBASIC12.89□□□□□ -0.35
FOXG1P55316 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
FOXG1P55316 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.89□□□□□ -0.35
FOXG1P55316 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
FOXG1P55316 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
FOXG1P55316 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
FOXG1P55316 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
FOXG1P55316 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.88□□□□□ -0.35
FOXG1P55316 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 DPM3-202ENST00000368399 517 ntBASIC12.88□□□□□ -0.35
FOXG1P55316 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.88□□□□□ -0.35
FOXG1P55316 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.88□□□□□ -0.35
FOXG1P55316 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.88□□□□□ -0.35
FOXG1P55316 AL035414.1-201ENST00000451327 857 ntBASIC12.88□□□□□ -0.35
FOXG1P55316 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.88□□□□□ -0.35
FOXG1P55316 SCARNA21-201ENST00000517026 139 ntBASIC12.88□□□□□ -0.35
FOXG1P55316 AP001258.2-201ENST00000529891 490 ntBASIC12.88□□□□□ -0.35
FOXG1P55316 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.88□□□□□ -0.35
FOXG1P55316 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.88□□□□□ -0.35
FOXG1P55316 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.88□□□□□ -0.35
FOXG1P55316 AL023803.2-201ENST00000620080 638 ntBASIC12.88□□□□□ -0.35
FOXG1P55316 AC068587.8-201ENST00000641239 219 ntBASIC12.88□□□□□ -0.35
FOXG1P55316 AC004923.1-202ENST00000642106 209 ntBASIC12.88□□□□□ -0.35
FOXG1P55316 CYP4F23P-201ENST00000593402 1579 ntBASIC12.88□□□□□ -0.35
FOXG1P55316 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.88□□□□□ -0.35
FOXG1P55316 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.88□□□□□ -0.35
FOXG1P55316 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
FOXG1P55316 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.88□□□□□ -0.35
FOXG1P55316 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.88□□□□□ -0.35
FOXG1P55316 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FOXG1P55316 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
FOXG1P55316 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
FOXG1P55316 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.87□□□□□ -0.35
FOXG1P55316 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.87□□□□□ -0.35
FOXG1P55316 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.87□□□□□ -0.35
FOXG1P55316 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms