Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDH13P55290 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 AC020910.5-201ENST00000623668 1865 ntBASIC14.48□□□□□ -0.09
CDH13P55290 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH13P55290 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH13P55290 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CDH13P55290 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.47□□□□□ -0.09
CDH13P55290 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 MSTO2P-201ENST00000314835 1709 ntBASIC14.47□□□□□ -0.09
CDH13P55290 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDH13P55290 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 RN7SKP230-201ENST00000365642 335 ntBASIC14.47□□□□□ -0.09
CDH13P55290 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CDH13P55290 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH13P55290 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH13P55290 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 AJ011932.1-201ENST00000621707 465 ntBASIC14.47□□□□□ -0.09
CDH13P55290 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH13P55290 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH13P55290 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH13P55290 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 AL359881.3-201ENST00000602640 1721 ntBASIC14.46□□□□□ -0.09
CDH13P55290 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CDH13P55290 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH13P55290 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 AC020910.6-201ENST00000623084 1459 ntBASIC14.46□□□□□ -0.09
CDH13P55290 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH13P55290 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH13P55290 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH13P55290 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.46□□□□□ -0.09
CDH13P55290 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDH13P55290 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH13P55290 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.46□□□□□ -0.09
CDH13P55290 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms