Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB28P51157 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
RAB28P51157 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB28P51157 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB28P51157 AL008718.2-201ENST00000609206 1313 ntBASIC14.21□□□□□ -0.13
RAB28P51157 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB28P51157 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB28P51157 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB28P51157 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB28P51157 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB28P51157 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.21□□□□□ -0.13
RAB28P51157 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB28P51157 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB28P51157 AL645933.1-201ENST00000440087 609 ntBASIC14.21□□□□□ -0.13
RAB28P51157 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB28P51157 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB28P51157 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB28P51157 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 MIR6869-201ENST00000619434 62 ntBASIC14.21□□□□□ -0.13
RAB28P51157 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB28P51157 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB28P51157 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB28P51157 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RAB28P51157 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB28P51157 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB28P51157 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB28P51157 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.21□□□□□ -0.14
RAB28P51157 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RAB28P51157 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RAB28P51157 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB28P51157 KLF2P1-201ENST00000447438 1042 ntBASIC14.2□□□□□ -0.14
RAB28P51157 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB28P51157 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.2□□□□□ -0.14
RAB28P51157 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 MIR4538-201ENST00000581377 78 ntBASIC14.2□□□□□ -0.14
RAB28P51157 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB28P51157 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
RAB28P51157 AL022328.3-201ENST00000607943 679 ntBASIC14.2□□□□□ -0.14
RAB28P51157 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 MIR6074-201ENST00000612054 107 ntBASIC14.2□□□□□ -0.14
RAB28P51157 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 Z98259.2-201ENST00000641583 609 ntBASIC14.2□□□□□ -0.14
RAB28P51157 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB28P51157 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB28P51157 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB28P51157 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms