Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 AC134312.5-201ENST00000568031 1313 ntBASIC13.7□□□□□ -0.22
HTR3AP46098 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
HTR3AP46098 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HTR3AP46098 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.7□□□□□ -0.22
HTR3AP46098 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR3AP46098 AC007389.4-201ENST00000454674 793 ntBASIC13.7□□□□□ -0.22
HTR3AP46098 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HTR3AP46098 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.7□□□□□ -0.22
HTR3AP46098 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.7□□□□□ -0.22
HTR3AP46098 TDH-203ENST00000531764 1110 ntBASIC13.7□□□□□ -0.22
HTR3AP46098 AC015936.2-201ENST00000593177 259 ntBASIC13.7□□□□□ -0.22
HTR3AP46098 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.7□□□□□ -0.22
HTR3AP46098 AC010319.3-201ENST00000597028 470 ntBASIC13.7□□□□□ -0.22
HTR3AP46098 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR3AP46098 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR3AP46098 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR3AP46098 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HTR3AP46098 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HTR3AP46098 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.69□□□□□ -0.22
HTR3AP46098 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HTR3AP46098 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.69□□□□□ -0.22
HTR3AP46098 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.69□□□□□ -0.22
HTR3AP46098 TLE1P1-201ENST00000422965 589 ntBASIC13.69□□□□□ -0.22
HTR3AP46098 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.69□□□□□ -0.22
HTR3AP46098 AC068587.3-201ENST00000526613 355 ntBASIC13.69□□□□□ -0.22
HTR3AP46098 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 MIR5189-201ENST00000577370 114 ntBASIC13.69□□□□□ -0.22
HTR3AP46098 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.69□□□□□ -0.22
HTR3AP46098 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HTR3AP46098 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
HTR3AP46098 AL591122.2-201ENST00000624125 1853 ntBASIC13.69□□□□□ -0.22
HTR3AP46098 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HTR3AP46098 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HTR3AP46098 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 AC023090.2-201ENST00000625182 2110 ntBASIC13.69□□□□□ -0.22
HTR3AP46098 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HTR3AP46098 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HTR3AP46098 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HTR3AP46098 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR3AP46098 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR3AP46098 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR3AP46098 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HTR3AP46098 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HTR3AP46098 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.68□□□□□ -0.22
HTR3AP46098 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HTR3AP46098 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.68□□□□□ -0.22
HTR3AP46098 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms