Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 AC004461.1-201ENST00000412461 403 ntBASIC10.03□□□□□ -0.8
CXCL5P42830 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
CXCL5P42830 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 GPS2P2-201ENST00000430745 888 ntBASIC10.03□□□□□ -0.8
CXCL5P42830 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.03□□□□□ -0.8
CXCL5P42830 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.03□□□□□ -0.8
CXCL5P42830 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.03□□□□□ -0.8
CXCL5P42830 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
CXCL5P42830 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 LINC01115-203ENST00000606068 577 ntBASIC10.03□□□□□ -0.8
CXCL5P42830 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 REXO1L1P-201ENST00000379010 6598 ntBASIC10.03□□□□□ -0.8
CXCL5P42830 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 AC023090.2-201ENST00000625182 2110 ntBASIC10.03□□□□□ -0.8
CXCL5P42830 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.02□□□□□ -0.8
CXCL5P42830 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.02□□□□□ -0.8
CXCL5P42830 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
CXCL5P42830 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
CXCL5P42830 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CXCL5P42830 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.02□□□□□ -0.8
CXCL5P42830 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CXCL5P42830 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
CXCL5P42830 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
CXCL5P42830 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CXCL5P42830 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC10.02□□□□□ -0.8
CXCL5P42830 AC105206.1-202ENST00000314927 2368 ntBASIC10.02□□□□□ -0.8
CXCL5P42830 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
CXCL5P42830 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.02□□□□□ -0.8
CXCL5P42830 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.02□□□□□ -0.8
CXCL5P42830 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.02□□□□□ -0.81
CXCL5P42830 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
CXCL5P42830 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.02□□□□□ -0.81
CXCL5P42830 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
CXCL5P42830 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.02□□□□□ -0.81
CXCL5P42830 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
CXCL5P42830 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms