Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.93□□□□□ -0.02
VCLP18206 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.92□□□□□ -0.02
VCLP18206 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.92□□□□□ -0.02
VCLP18206 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VCLP18206 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VCLP18206 MIR658-201ENST00000385210 100 ntBASIC14.92□□□□□ -0.02
VCLP18206 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 MIR1909-201ENST00000411312 80 ntBASIC14.92□□□□□ -0.02
VCLP18206 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.92□□□□□ -0.02
VCLP18206 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.92□□□□□ -0.02
VCLP18206 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
VCLP18206 AC022210.1-201ENST00000449856 793 ntBASIC14.92□□□□□ -0.02
VCLP18206 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VCLP18206 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
VCLP18206 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.92□□□□□ -0.02
VCLP18206 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VCLP18206 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 AC092135.3-201ENST00000624151 1846 ntBASIC14.92□□□□□ -0.02
VCLP18206 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.92□□□□□ -0.02
VCLP18206 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VCLP18206 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VCLP18206 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VCLP18206 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
VCLP18206 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.91□□□□□ -0.02
VCLP18206 AC099521.3-201ENST00000624251 2938 ntBASIC14.91□□□□□ -0.02
VCLP18206 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.91□□□□□ -0.02
VCLP18206 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.91□□□□□ -0.02
VCLP18206 KRT223P-202ENST00000449164 1292 ntBASIC14.91□□□□□ -0.02
VCLP18206 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.91□□□□□ -0.02
VCLP18206 RNA5SP486-201ENST00000515961 83 ntBASIC14.91□□□□□ -0.02
VCLP18206 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.91□□□□□ -0.02
VCLP18206 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.91□□□□□ -0.02
VCLP18206 AP000812.2-201ENST00000538934 718 ntBASIC14.91□□□□□ -0.02
VCLP18206 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.91□□□□□ -0.02
VCLP18206 KRT90P-201ENST00000549264 1064 ntBASIC14.91□□□□□ -0.02
VCLP18206 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.91□□□□□ -0.02
VCLP18206 GNRHR2-203ENST00000581100 1187 ntBASIC14.91□□□□□ -0.02
VCLP18206 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.91□□□□□ -0.02
VCLP18206 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 RHOXF1P1-202ENST00000635473 501 ntBASIC14.91□□□□□ -0.02
VCLP18206 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VCLP18206 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VCLP18206 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.91□□□□□ -0.02
VCLP18206 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.91□□□□□ -0.02
VCLP18206 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 AC097359.2-201ENST00000604992 2389 ntBASIC14.91□□□□□ -0.02
VCLP18206 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VCLP18206 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VCLP18206 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms