Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CTSBP07858 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CTSBP07858 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.89□□□□□ -0.19
CTSBP07858 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 AL157791.1-201ENST00000553667 1699 ntBASIC13.88□□□□□ -0.19
CTSBP07858 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 AC078875.1-201ENST00000431907 724 ntBASIC13.88□□□□□ -0.19
CTSBP07858 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.88□□□□□ -0.19
CTSBP07858 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 AC024681.1-201ENST00000521917 487 ntBASIC13.88□□□□□ -0.19
CTSBP07858 AC003686.1-201ENST00000550956 1034 ntBASIC13.88□□□□□ -0.19
CTSBP07858 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.88□□□□□ -0.19
CTSBP07858 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CTSBP07858 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.88□□□□□ -0.19
CTSBP07858 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.88□□□□□ -0.19
CTSBP07858 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 AL136295.7-201ENST00000619226 1200 ntBASIC13.88□□□□□ -0.19
CTSBP07858 AC133540.1-201ENST00000620845 1019 ntBASIC13.88□□□□□ -0.19
CTSBP07858 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CTSBP07858 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 AC011498.7-201ENST00000624986 2027 ntBASIC13.88□□□□□ -0.19
CTSBP07858 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.88□□□□□ -0.19
CTSBP07858 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CTSBP07858 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSBP07858 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.87□□□□□ -0.19
CTSBP07858 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.87□□□□□ -0.19
CTSBP07858 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CTSBP07858 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSBP07858 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSBP07858 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.87□□□□□ -0.19
CTSBP07858 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CTSBP07858 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 MIR769-201ENST00000390225 118 ntBASIC13.87□□□□□ -0.19
CTSBP07858 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CTSBP07858 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 ISCA2P1-201ENST00000425548 448 ntBASIC13.87□□□□□ -0.19
CTSBP07858 OR2R1P-201ENST00000441404 914 ntBASIC13.87□□□□□ -0.19
CTSBP07858 IMP3P2-201ENST00000489760 475 ntBASIC13.87□□□□□ -0.19
CTSBP07858 AC022447.6-201ENST00000515522 438 ntBASIC13.87□□□□□ -0.19
CTSBP07858 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.87□□□□□ -0.19
CTSBP07858 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CTSBP07858 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSBP07858 AC105129.2-201ENST00000559536 390 ntBASIC13.87□□□□□ -0.19
CTSBP07858 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 MIR3619-201ENST00000579667 83 ntBASIC13.87□□□□□ -0.19
CTSBP07858 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 MEG3_2.1-201ENST00000611456 105 ntBASIC13.87□□□□□ -0.19
CTSBP07858 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSBP07858 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms