Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQB2P05538 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 GK-202ENST00000378941 458 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AC079178.1-201ENST00000420915 656 ntBASIC14.92□□□□□ -0.02
HLA-DQB2P05538 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AC009955.4-201ENST00000597192 544 ntBASIC14.92□□□□□ -0.02
HLA-DQB2P05538 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AC009093.10-201ENST00000641956 1442 ntBASIC14.92□□□□□ -0.02
HLA-DQB2P05538 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DQB2P05538 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 OR2I1P-209ENST00000641730 5365 ntBASIC14.91□□□□□ -0.02
HLA-DQB2P05538 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 FAM21FP-201ENST00000426241 1131 ntBASIC14.91□□□□□ -0.02
HLA-DQB2P05538 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 AL035414.1-201ENST00000451327 857 ntBASIC14.91□□□□□ -0.02
HLA-DQB2P05538 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.91□□□□□ -0.02
HLA-DQB2P05538 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms