Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UPK2O00526 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UPK2O00526 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK2O00526 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.86□□□□□ -0.51
UPK2O00526 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
UPK2O00526 MBLAC2-202ENST00000514906 1936 ntBASIC11.86□□□□□ -0.51
UPK2O00526 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.86□□□□□ -0.51
UPK2O00526 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.86□□□□□ -0.51
UPK2O00526 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.86□□□□□ -0.51
UPK2O00526 LINC02560-201ENST00000596379 459 ntBASIC11.86□□□□□ -0.51
UPK2O00526 AP001002.3-201ENST00000623482 206 ntBASIC11.86□□□□□ -0.51
UPK2O00526 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.86□□□□□ -0.51
UPK2O00526 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 AC011498.7-201ENST00000624986 2027 ntBASIC11.86□□□□□ -0.51
UPK2O00526 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
UPK2O00526 FKBP4P6-201ENST00000457486 1332 ntBASIC11.86□□□□□ -0.51
UPK2O00526 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK2O00526 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK2O00526 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
UPK2O00526 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.85□□□□□ -0.51
UPK2O00526 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.85□□□□□ -0.51
UPK2O00526 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
UPK2O00526 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 AC139712.1-201ENST00000378256 1875 ntBASIC11.85□□□□□ -0.51
UPK2O00526 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
UPK2O00526 AC104581.4-201ENST00000623126 3052 ntBASIC11.85□□□□□ -0.51
UPK2O00526 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.85□□□□□ -0.51
UPK2O00526 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
UPK2O00526 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK2O00526 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms