Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LOC285556D6RIA3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LOC285556D6RIA3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.33■□□□□ 0.21
LOC285556D6RIA3 SHMT1P1-201ENST00000419974 1312 ntBASIC16.33■□□□□ 0.21
LOC285556D6RIA3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LOC285556D6RIA3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
LOC285556D6RIA3 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LOC285556D6RIA3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.33■□□□□ 0.21
LOC285556D6RIA3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 MIR1301-201ENST00000408518 82 ntBASIC16.33■□□□□ 0.2
LOC285556D6RIA3 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 AC092862.1-201ENST00000541534 533 ntBASIC16.33■□□□□ 0.2
LOC285556D6RIA3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 AL031673.1-201ENST00000611460 466 ntBASIC16.33■□□□□ 0.2
LOC285556D6RIA3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LOC285556D6RIA3 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.33■□□□□ 0.2
LOC285556D6RIA3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 FGD5P1-202ENST00000614866 2498 ntBASIC16.32■□□□□ 0.2
LOC285556D6RIA3 AC023824.1-201ENST00000562945 2975 ntBASIC16.32■□□□□ 0.2
LOC285556D6RIA3 LINC00554-201ENST00000564841 3011 ntBASIC16.32■□□□□ 0.2
LOC285556D6RIA3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.32■□□□□ 0.2
LOC285556D6RIA3 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.32■□□□□ 0.2
LOC285556D6RIA3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 CICP14-201ENST00000629111 2732 ntBASIC16.31■□□□□ 0.2
LOC285556D6RIA3 AC132872.4-202ENST00000622924 2756 ntBASIC16.31■□□□□ 0.2
LOC285556D6RIA3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 RN7SKP155-201ENST00000516031 288 ntBASIC16.31■□□□□ 0.2
LOC285556D6RIA3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 CYP4F36P-201ENST00000589193 186 ntBASIC16.31■□□□□ 0.2
LOC285556D6RIA3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 MTHFR-210ENST00000641407 2387 ntBASIC16.31■□□□□ 0.2
LOC285556D6RIA3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LOC285556D6RIA3 USP17L6P-201ENST00000382470 1197 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms