Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
LOC102724428A0A0B4J2F2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.39■□□□□ 0.54
LOC102724428A0A0B4J2F2 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LOC102724428A0A0B4J2F2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 TREHP1-201ENST00000531328 465 ntBASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC010976.2-201ENST00000609697 852 ntBASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 MIR6746-201ENST00000620971 63 ntBASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LOC102724428A0A0B4J2F2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC244197.1-201ENST00000456494 951 ntBASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 RN7SL582P-201ENST00000491078 279 ntBASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 RN7SL767P-201ENST00000493013 295 ntBASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 KRT8P2-201ENST00000556193 944 ntBASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LOC102724428A0A0B4J2F2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC005586.2-201ENST00000563946 837 ntBASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC010632.2-201ENST00000588369 1224 ntBASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 AP005264.6-204ENST00000588436 719 ntBASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.37■□□□□ 0.53
LOC102724428A0A0B4J2F2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms