Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 AC126365.1-201ENST00000578585 1514 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 Z69890.1-201ENST00000382990 339 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 RN7SL81P-201ENST00000493781 261 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 MIR4522-201ENST00000584932 87 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 AC023024.2-201ENST00000623561 1993 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 AC092384.3-202ENST00000564646 2873 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 AC018463.1-201ENST00000456674 917 ntBASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 NDUFS6P1-201ENST00000485187 316 ntBASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 IGHV3-37-201ENST00000518544 340 ntBASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 RPL17P45-201ENST00000586289 509 ntBASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCDC187A0A096LP49 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 MRPL37P1-201ENST00000592451 1337 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 AC009093.10-201ENST00000641956 1442 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 LINC02228-204ENST00000642115 2962 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 FTH1P22-201ENST00000456305 520 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 RPL18AP3-201ENST00000462885 528 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 RN7SL530P-201ENST00000485097 298 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 AP003398.1-201ENST00000531124 318 ntBASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC187A0A096LP49 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms