Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 MYCLP2-201ENST00000449268 967 ntBASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 BRI3BPP1-201ENST00000594224 787 ntBASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 AL049840.4-201ENST00000602422 811 ntBASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LIN7CQ9NUP9 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 AC092552.1-201ENST00000547243 906 ntBASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 CHCHD2P3-201ENST00000603038 451 ntBASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 AC008494.3-201ENST00000606615 944 ntBASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LIN7CQ9NUP9 INTS4P2-202ENST00000614726 2019 ntBASIC12.33□□□□□ -0.43
LIN7CQ9NUP9 AL158070.2-201ENST00000623713 1621 ntBASIC12.33□□□□□ -0.43
LIN7CQ9NUP9 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LIN7CQ9NUP9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms