Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 AC006001.1-201ENST00000325130 474 ntBASIC12.98□□□□□ -0.33
CDH20Q9HBT6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 MIR658-201ENST00000385210 100 ntBASIC12.98□□□□□ -0.33
CDH20Q9HBT6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 MIR1909-201ENST00000411312 80 ntBASIC12.98□□□□□ -0.33
CDH20Q9HBT6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 KRT223P-202ENST00000449164 1292 ntBASIC12.98□□□□□ -0.33
CDH20Q9HBT6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 AC126335.2-201ENST00000623362 4637 ntBASIC12.98□□□□□ -0.33
CDH20Q9HBT6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CDH20Q9HBT6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 AC018442.1-201ENST00000421439 2061 ntBASIC12.97□□□□□ -0.33
CDH20Q9HBT6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 COX5BP1-201ENST00000507622 393 ntBASIC12.97□□□□□ -0.33
CDH20Q9HBT6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 MIR6775-201ENST00000617557 69 ntBASIC12.97□□□□□ -0.33
CDH20Q9HBT6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDH20Q9HBT6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms