Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AC106886.4-201ENST00000623557 2502 ntBASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 MIR648-201ENST00000385046 94 ntBASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AC092810.2-201ENST00000431570 362 ntBASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AC103724.2-201ENST00000520355 476 ntBASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AC009132.1-201ENST00000565194 320 ntBASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AC022382.1-201ENST00000602768 336 ntBASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AL591471.1-201ENST00000621855 229 ntBASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL25A1Q9BXS0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 TPM3P7-201ENST00000338274 732 ntBASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 RBMX2P5-201ENST00000424312 969 ntBASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 VDAC1P11-201ENST00000458323 852 ntBASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 AL078624.1-201ENST00000604004 547 ntBASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 AC116036.2-201ENST00000607592 462 ntBASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 AL109954.3-201ENST00000615088 558 ntBASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 AC007613.1-201ENST00000572811 2597 ntBASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.44□□□□□ -0.1
COL25A1Q9BXS0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.43□□□□□ -0.1
COL25A1Q9BXS0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms