Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CGREF1Q99674 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CGREF1Q99674 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CGREF1Q99674 AC015818.8-201ENST00000587907 1519 ntBASIC14.1□□□□□ -0.15
CGREF1Q99674 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.1□□□□□ -0.15
CGREF1Q99674 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CGREF1Q99674 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.09□□□□□ -0.15
CGREF1Q99674 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 AC023794.5-201ENST00000564380 2157 ntBASIC14.09□□□□□ -0.15
CGREF1Q99674 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CGREF1Q99674 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CGREF1Q99674 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.09□□□□□ -0.15
CGREF1Q99674 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.09□□□□□ -0.15
CGREF1Q99674 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.09□□□□□ -0.15
CGREF1Q99674 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.09□□□□□ -0.15
CGREF1Q99674 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.09□□□□□ -0.15
CGREF1Q99674 DNAJB3-202ENST00000449667 1266 ntBASIC14.09□□□□□ -0.15
CGREF1Q99674 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.09□□□□□ -0.15
CGREF1Q99674 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.09□□□□□ -0.15
CGREF1Q99674 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CGREF1Q99674 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.09□□□□□ -0.15
CGREF1Q99674 AL603764.1-201ENST00000636452 321 ntBASIC14.09□□□□□ -0.15
CGREF1Q99674 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CGREF1Q99674 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CGREF1Q99674 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.09□□□□□ -0.15
CGREF1Q99674 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.09□□□□□ -0.15
CGREF1Q99674 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CGREF1Q99674 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.09□□□□□ -0.15
CGREF1Q99674 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CGREF1Q99674 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CGREF1Q99674 AC011498.7-201ENST00000624986 2027 ntBASIC14.08□□□□□ -0.15
CGREF1Q99674 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CGREF1Q99674 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.08□□□□□ -0.15
CGREF1Q99674 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.08□□□□□ -0.15
CGREF1Q99674 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CGREF1Q99674 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CGREF1Q99674 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.15
CGREF1Q99674 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CGREF1Q99674 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 RNU1-114P-201ENST00000365297 166 ntBASIC14.08□□□□□ -0.16
CGREF1Q99674 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.08□□□□□ -0.16
CGREF1Q99674 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.08□□□□□ -0.16
CGREF1Q99674 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.08□□□□□ -0.16
CGREF1Q99674 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.08□□□□□ -0.16
CGREF1Q99674 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.08□□□□□ -0.16
CGREF1Q99674 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.08□□□□□ -0.16
CGREF1Q99674 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.08□□□□□ -0.16
CGREF1Q99674 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.08□□□□□ -0.16
CGREF1Q99674 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.08□□□□□ -0.16
CGREF1Q99674 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 AC008738.7-201ENST00000609744 511 ntBASIC14.08□□□□□ -0.16
CGREF1Q99674 AC007431.3-201ENST00000623221 587 ntBASIC14.08□□□□□ -0.16
CGREF1Q99674 AC004840.1-201ENST00000636359 365 ntBASIC14.08□□□□□ -0.16
CGREF1Q99674 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.08□□□□□ -0.16
CGREF1Q99674 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGREF1Q99674 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.08□□□□□ -0.16
CGREF1Q99674 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CGREF1Q99674 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms